Source code for pymoo.visualization.star_coordinate
import numpy as np
from pymoo.visualization.util import plot_axes_arrow, plot_axis_labels, equal_axis, no_ticks, parse_bounds, \
normalize, get_uniform_points_around_circle
from pymoo.docs import parse_doc_string
from pymoo.core.plot import Plot
[docs]
class StarCoordinate(Plot):
def __init__(self,
axis_extension=1.03,
**kwargs):
"""
Star Coordinate Plot
Parameters
----------
axis_style : {axis_style}
labels : {labels}
endpoint_style : dict
Endpoints are drawn at each extreme point of an objective. This style can be modified.
Other Parameters
----------------
figsize : {figsize}
title : {title}
legend : {legend}
tight_layout : {tight_layout}
cmap : {cmap}
"""
super().__init__(**kwargs)
self.axis_extension = axis_extension
if "arrow_style" not in kwargs:
self.arrow_style = {
"head_width": 0.02,
"head_length": 0.01
}
else:
self.arrow_style = kwargs["arrow_style"]
def _do(self):
# initial a figure with a single plot
self.init_figure()
# equal axis length and no ticks
equal_axis(self.ax)
no_ticks(self.ax)
# determine the overall scale of points
_F = np.vstack([e[0] for e in self.to_plot])
_min, _max = _F.min(axis=0), _F.max(axis=0)
V = get_uniform_points_around_circle(self.n_dim)
plot_axes_arrow(self.ax, V, extend_factor=self.axis_extension, **{**self.axis_style, **self.arrow_style})
plot_axis_labels(self.ax, V, self.get_labels(), **self.axis_label_style)
# normalize in range for this plot - here no implicit normalization as in radviz
bounds = parse_bounds(self.bounds, self.n_dim)
to_plot_norm = normalize(self.to_plot, bounds)
for k, (F, kwargs) in enumerate(to_plot_norm):
N = (F[..., None] * V).sum(axis=1)
self.ax.scatter(N[:, 0], N[:, 1], **kwargs)
parse_doc_string(StarCoordinate.__init__)